Resources

Soybean Expression Atlas V2

A collection of over 5000 publicly available soybean RNAseq samples.

SoyPestGCN

SoyPestGCN is an R package that contains a Shiny app to let users explore a gene coexpression network of soybean tissues infested with insects.

SoyFungiGCN

SoyFungiGCN is an R package that contains a Shiny app to let users explore a gene coexpression network of soybean tissues infected with phytopathogenic fungi.

BioNERO

BioNERO is an R/Bioconductor package that aims to facilitate network analyses by integrating all standard analysis steps, including data preprocessing, inference of gene regulatory and coexpression network from expression data, functional analyses, and network intra and interspecies network comparisons.

Soybean Expression Atlas

A collection of 1298 publicly available soybean RNAseq samples.

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